PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538922.1_FGP020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 210aa    MW: 23267.3 Da    PI: 9.564
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538922.1_FGP020genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.9e-1061119563
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        kr +r   NR +A rs +RK  +i+eLe+kv+ L++e + L  +l +++  +a l +++
  KN538922.1_FGP020  61 KRVKRVLANRQSAARSKERKMRYIAELEQKVQILQSEATNLSAQLTMMQRDSAGLATQN 119
                        999***************************************99999988887776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-1557121IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.59959122IPR004827Basic-leucine zipper domain
PfamPF001706.4E-961119IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-961118No hitNo description
SuperFamilySSF579592.67E-1161112No hitNo description
CDDcd147032.39E-1862113No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MDSLIGKFNF TAGAAAAAGN GVALGPNRFS LEFGSGEFTP SEMKKIMADE KLAEMALADP  60
KRVKRVLANR QSAARSKERK MRYIAELEQK VQILQSEATN LSAQLTMMQR DSAGLATQNN  120
ELKFRLHAME QQAQLRDALN EALTTEVQRL KLATAELGDS CSSRSLAQQI QLNAQNQMFQ  180
LQQQQATQIP FYQLQQSQQN GAAKNNESKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015627932.11e-145PREDICTED: transcription factor RF2b-like
SwissprotQ6S4P41e-51RF2B_ORYSJ; Transcription factor RF2b
TrEMBLA0A0D3FDA61e-148A0A0D3FDA6_9ORYZ; Uncharacterized protein
TrEMBLA0A0E0GG661e-146A0A0E0GG66_ORYNI; Uncharacterized protein
STRINGBGIOSGA011761-PA1e-145(Oryza sativa Indica Group)
STRINGLOC_Os03g03550.11e-145(Oryza sativa Japonica Group)
STRINGORGLA03G0019600.11e-145(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35363576
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.32e-65bZIP family protein